Index

A

align_streamline() (in module unravel.stream) angle_difference() (in module unravel.core)

angular_agreement() (in module unravel.core) angular_weighting() (in module unravel.core)

C

closest_fixel_only() (in module unravel.core) compute_alpha_surface() (in module unravel.viz) compute_subsegments() (in module unravel.core)

connectivity_matrix() (in module unravel.analysis) convert_to_gif() (in module unravel.viz) create_gif_pyvista_plotter() (in module unravel.viz) create_streamline_propagation_gif() (in module unravel.viz)

D

deltas_to_D() (in module unravel.core)

E

export_alpha_surface() (in module unravel.viz)

extract_nodes() (in module unravel.stream) extract_nodes_legacy() (in module unravel.stream)

F

fraction_weighting() (in module unravel.core)

fuse_trk() (in module unravel.utils)

G

get_dist_from_median_trajectory() (in module unravel.stream) get_fixel_weight() (in module unravel.core) get_fixel_weight_DIAMOND() (in module unravel.core) get_fixel_weight_MF() (in module unravel.core) get_metric_along_trajectory() (in module unravel.analysis) get_microstructure_map() (in module unravel.core) get_roi_sections_from_nodes() (in module unravel.stream) get_streamline_angle() (in module unravel.utils)

get_streamline_count() (in module unravel.utils) get_streamline_density() (in module unravel.utils) get_streamline_lengths() (in module unravel.utils) get_streamline_number_from_index() (in module unravel.stream) get_streamline_weights() (in module unravel.core) get_weighted_mean() (in module unravel.core) get_weighted_sums() (in module unravel.core) grayscale_to_rgb() (in module unravel.viz)

L

load_sift2_weights() (in module unravel.utils)

M

main_fixel_map() (in module unravel.core) module unravel unravel.analysis, [1] unravel.core, [1] unravel.example unravel.stream, [1] unravel.utils, [1] unravel.viz, [1]

N

normalize_color() (in module unravel.utils)

O

overlap_volumes() (in module unravel.viz)

P

peak_to_tensor() (in module unravel.core) peaks_to_peak() (in module unravel.utils) peaks_to_RGB() (in module unravel.utils) plot_alpha_surface_matplotlib() (in module unravel.viz) plot_alpha_surface_pyvista() (in module unravel.viz) plot_metric_along_trajectory() (in module unravel.viz)

plot_nodes_and_surfaces() (in module unravel.viz) plot_roi_sections() (in module unravel.viz) plot_streamline_metrics() (in module unravel.core) plot_streamline_metrics_old() (in module unravel.core) plot_streamline_trajectory() (in module unravel.utils) plot_trk() (in module unravel.viz)

R

relative_angular_weighting() (in module unravel.core)

remove_outlier_streamlines() (in module unravel.stream) remove_streamlines() (in module unravel.stream)

S

smooth_streamlines() (in module unravel.stream)

spherical_to_xyz() (in module unravel.utils)

T

t6ToMFpeak() (in module unravel.core) tensor_to_DTI() (in module unravel.utils) tensor_to_peak() (in module unravel.core)

total_segment_length() (in module unravel.core) tract_to_ROI() (in module unravel.utils) tract_to_streamlines() (in module unravel.core)

U

unravel module unravel.analysis module, [1] unravel.core module, [1] unravel.example module

unravel.stream module, [1] unravel.utils module, [1] unravel.viz module, [1]

V

volumetric_agreement() (in module unravel.core)

voxel_distance() (in module unravel.core) voxels_from_segment() (in module unravel.core)

W

weighted_mean_dev() (in module unravel.core)

X

xyz_to_spherical() (in module unravel.utils)